There is better advice givers here, but if you change out the tube for aluminum window screen it will be just fine, removing the tube removed the problem (trapped moisture), the air will keep it dry, the mold wont survive in a drier exposed environment... many paint the south facing sides of the exposed trunks with a watered down white latex, prevents frost popping of the bark that the tubing also was preventing . Im guessing venting the tube would work also if you wanted to keep the tube...
I wouldn't leave the trunk unprotected its just mice and rabbit candy without some protection